Learning Objectives (aligned with Cambridge International AS & A Level Biology 9700)
- Define ecosystem and niche and explain their significance for biodiversity. (Key concept: Organisms in their environment)
- Calculate species richness, evenness and diversity indices (Shannon‑Wiener, Simpson’s). (Key concept: Observation & experiment)
- Explain the role of keystone species, ecosystem engineers and genetic diversity in maintaining ecosystems. (Key concept: Natural selection & evolution)
- Identify major threats to biodiversity and evaluate the effectiveness of conservation strategies (in‑situ & ex‑situ). (Key concept: Human impact on the environment)
- Describe the taxonomic hierarchy, binomial nomenclature and modern phylogenetic methods. (Key concept: Cells as the unit of life – molecular basis of classification)
- Link ecosystems and niches to energy flow, nutrient cycles, population dynamics and evolutionary processes (AO2/AO3). (Key concepts: Energy flow, biochemical processes, DNA, natural selection)
Master‑Topic Checklist – Coverage of Syllabus 9700
| Syllabus Topic |
Module in Notes |
Status |
Action Needed |
| 1. Cell structure | – | Missing | Create a “Cell Foundations” module |
| 2. Biomolecules | – | Missing | Develop a “Macromolecules & Enzymes” module |
| 3. Enzymes | – | Missing | Integrate with biomolecules |
| 4. Membranes & transport | – | Missing | Add “Cellular Transport” module |
| 5. Mitosis & meiosis | – | Missing | Include “Cell Division” module |
| 6. Nucleic acids & protein synthesis | – | Missing | Link to “Genetic Diversity” section |
| 7. Transport in organisms | – | Missing | Develop “Physiology of Transport” module |
| 8. Gas exchange & respiration | – | Missing | Include in “Energy Flow” box |
| 9. Infectious disease | – | Missing | Create “Pathogens & Immunity” module |
| 10. Immunity | – | Missing | Combine with disease module |
| 11. Homeostasis (AS) | – | Missing | Add “Regulation & Homeostasis” module |
| 12. Photosynthesis (A‑level) | – | Missing | Insert in “Energy Flow” section |
| 13. Respiration (A‑level) | – | Missing | Insert in “Energy Flow” section |
| 14. Genetics (A‑level) | Genetic diversity & population genetics | Partial | Expand with Hardy‑Weinberg calculations |
| 15. Evolution (A‑level) | Evolution & Biodiversity sub‑section | Partial | Add speciation mechanisms and adaptive radiation |
| 16. Ecology (A‑level) – Topics 1‑4 | All covered (ecosystem, niche, biodiversity, threats, conservation) | Complete | Fine‑tune depth of evaluation |
| 17. Human impact (A‑level) | Threats & case‑study worksheet | Partial | Include climate‑change scenario analysis |
| 18. Classification, biodiversity & conservation | Core of these notes | Complete | Link explicitly to key concepts |
| 19. Practical skills (A‑level) | Practical/analytical activities | Complete | Provide mark‑scheme pointers |
Key Definitions
Ecosystem
An ecosystem is a self‑sustaining functional unit that includes:
- Biotic components: populations and communities of organisms.
- Abiotic components: climate, soil, water, light, nutrients, and physical factors.
- Interactions: energy flow (sun → producers → consumers → decomposers) and nutrient cycling (e.g., carbon, nitrogen, phosphorus).
Why it matters: Understanding ecosystems allows prediction of how changes (e.g., habitat loss, climate change) affect the whole web of life, a core requirement for AO2/AO3 exam questions.
Niche
A niche is the “profession” or role of a species (or population) within an ecosystem. It comprises:
- Range of abiotic conditions tolerated (temperature, moisture, pH).
- Resources used (food, shelter, nesting sites).
- Behavioural patterns (diurnal/nocturnal activity, foraging strategy).
- Biotic interactions (predation, competition, mutualism, parasitism).
Why it matters: Niche differentiation explains species coexistence and underpins concepts of competition, adaptive radiation and speciation (AO2/AO3).
Comparison: Ecosystem vs. Niche
| Aspect |
Ecosystem |
Niche |
| Scope |
Whole network of interacting biotic and abiotic components. |
Specific role of a single species (or population) within that network. |
| Components |
Populations, communities, climate, soil, water, energy flow, nutrient cycles. |
Habitat, resources used, activity pattern, inter‑specific interactions. |
| Scale |
From a puddle to a global biome. |
Usually species level (can be expressed for individuals). |
| Dynamics |
Succession, disturbance, climate change, anthropogenic impacts. |
Evolutionary adaptation, competitive exclusion, niche expansion or contraction. |
Link to Cambridge Key Concepts (six overarching ideas)
| Key Concept |
Relevant Biodiversity Content |
| Cells as the unit of life |
Genetic diversity, DNA barcoding, molecular phylogenetics. |
| Biochemical processes |
Energy flow through trophic levels; nutrient cycling. |
| DNA, genes & inheritance |
Population genetics (allele frequencies, heterozygosity), speciation. |
| Organisms in their environment |
Ecosystem structure, niche definition, keystone species. |
| Observation & experiment |
Diversity index calculations, field surveys, laboratory DNA barcoding. |
| Natural selection & evolution |
Evolution & Biodiversity sub‑section, adaptive radiation, niche differentiation. |
Biodiversity Concepts (Topic 18)
1. Species Richness & Evenness
- Species richness (S): total number of different species in a defined area.
- Evenness (E): how equally individuals are distributed among the species present.
2. Diversity Indices
| Index |
Formula |
What it measures |
| Shannon–Wiener (H′) |
H′ = – Σ (pᵢ ln pᵢ) where pᵢ = nᵢ / N |
Both richness and evenness; higher = greater diversity. |
| Simpson’s Index (D) |
D = Σ (pᵢ²); 1 – D = probability that two random individuals belong to different species |
Emphasises dominance; lower D = higher diversity. |
| Evenness (E) |
E = H′ / ln S |
Standardises H′ to a 0–1 scale. |
Worked Example (AO2)
Community A: 4 species, abundances 40, 30, 20, 10 (N = 100).
- pᵢ = 0.40, 0.30, 0.20, 0.10.
- H′ = –[(0.40 ln 0.40)+(0.30 ln 0.30)+(0.20 ln 0.20)+(0.10 ln 0.10)] ≈ 1.28.
- Evenness E = H′ / ln 4 = 1.28 / 1.386 ≈ 0.92 (high evenness).
3. Population Genetics (Extended)
- Allele frequency (p, q): proportion of each allele in a population.
- Hardy–Weinberg equation: p² + 2pq + q² = 1 (genotype frequencies).
- Heterozygosity (H): probability that two randomly chosen alleles are different; H = 2pq.
- Example calculation: In a beetle population, 64% are homozygous dominant (AA). p² = 0.64 → p = 0.8, q = 0.2. Expected heterozygotes (2pq) = 0.32 (32%).
Why it matters: Genetic diversity underpins a species’ capacity to adapt to environmental change – a key point for AO3 evaluation of conservation strategies.
4. Evolution & Biodiversity
- Sources of variation: mutation, recombination, gene flow.
- Natural selection: differential survival/reproduction based on phenotype; leads to changes in allele frequencies.
- Speciation mechanisms:
- Allopatric – geographic isolation (e.g., Darwin’s finches).
- Sympatric – ecological or polyploidy‑driven (e.g., cichlid radiations).
- Adaptive radiation: rapid evolution of multiple species from a common ancestor, each occupying a distinct niche (e.g., Hawaiian honeycreepers).
- Link to niche: New niches created by ecosystem engineers or environmental change can drive adaptive radiation.
5. Keystone Species & Ecosystem Engineers (Evaluation Required)
- Keystone species: Disproportionately large impact relative to abundance.
- Mechanism: top‑down control of prey populations, cascade effects on vegetation.
- Example: Sea otters → control sea‑urchins → protect kelp forests.
- Ecosystem engineers: Modify physical environment, creating or destroying habitats.
- Mechanism: physical alteration (dams, burrows) that changes water flow, sedimentation, or nutrient availability.
- Example: Beavers build dams → create ponds → increase habitat heterogeneity, support amphibians and water‑birds.
Major Threats to Biodiversity
| Threat |
Typical Impact |
Illustrative Case Study |
| Habitat loss & fragmentation |
Reduced population sizes, edge effects, loss of specialists. |
Amazon rainforest conversion to soy plantations (deforestation > 17 %/decade). |
| Over‑exploitation |
Population collapse, trophic cascades. |
Atlantic cod fisheries – stock collapsed in the 1990s. |
| Invasive species |
Competition, predation, disease transmission. |
Rats on New Zealand islands causing bird extinctions. |
| Pollution |
Habitat degradation, bioaccumulation, eutrophication. |
Coral bleaching driven by nutrient runoff and rising sea temperature. |
| Climate change |
Range shifts, phenological mismatches, increased extinction risk. |
Alpine plant communities moving upslope in the European Alps. |
Case‑Study Worksheet – Climate‑Change‑Driven Niche Shifts
Task: Using the supplied distribution maps for the European red‑winged grasshopper (Trimerotropis cristata) and the common toad (Bufo bufo), answer the following (AO3):
- Predict how a 2 °C rise in average summer temperature will alter the grasshopper’s niche breadth and geographic range.
- Discuss the likely indirect effects on the toad’s niche, considering prey availability and breeding pond temperature.
- Evaluate two management actions (e.g., assisted migration, creation of climate‑refugia corridors) and justify which would be most effective for maintaining community stability.
Conservation Strategies (Evaluation of Effectiveness)
| Strategy |
In‑situ / Ex‑situ |
Key Examples |
Advantages |
Limitations |
| Protected areas (national parks, nature reserves) |
In‑situ |
Yellowstone NP (USA), Kruger NP (South Africa) |
Preserves whole ecosystems; maintains natural processes. |
May be too small to support wide‑ranging species; enforcement challenges. |
| Habitat restoration & ecological corridors |
In‑situ |
Re‑forestation of peatlands in Ireland; wildlife overpasses in the UK. |
Reconnects fragmented populations, enhances gene flow. |
Long‑term funding required; success depends on surrounding land use. |
| Captive breeding & re‑introduction |
Ex‑situ → In‑situ |
California condor, Arabian oryx. |
Prevents immediate extinction; allows controlled genetic management. |
Risk of loss of wild behaviours; high cost; may not address original threats. |
| Legislation & trade control (CITES, national wildlife acts) |
Both |
Ban on ivory trade; regulation of shark‑fin imports. |
Provides legal framework; can reduce over‑exploitation. |
Enforcement varies; illegal trade may persist. |
| Community‑based conservation & sustainable use |
In‑situ |
Community forest management in Nepal; co‑management of marine reserves in Fiji. |
Encourages local stewardship; aligns livelihoods with biodiversity goals. |
Requires capacity building; success depends on socio‑economic incentives. |
IUCN Red List Categories (AO3)
- Extinct (EX)
- Extinct in the Wild (EW)
- Critically Endangered (CR)
- Endangered (EN)
- Vulnerable (VU)
- Near Threatened (NT)
- Least Concern (LC)
- Data Deficient (DD)
- Not Evaluated (NE)
Classification Systems (Taxonomy) – Connection to Biodiversity
- Hierarchical ranks: Domain → Kingdom → Phylum → Class → Order → Family → Genus → Species.
- Binomial nomenclature: Genus (capitalised) + specific epithet (lowercase), e.g., Panthera leo.
- Cladistics: Classification based on shared derived characters (synapomorphies); produces phylogenetic trees that illustrate evolutionary relationships.
- Molecular phylogenetics: Uses DNA/RNA sequences (e.g., cytochrome b, 16S rRNA, COI) to infer relationships; essential for modern biodiversity assessments and for identifying cryptic species.
Linking Ecosystem & Niche to Other Syllabus Topics
- Energy flow: Photosynthesis (A‑level) provides the primary energy input; the position of a species in a food chain reflects its niche (primary consumer, secondary consumer, etc.).
- Nutrient cycles: Decomposers occupy a niche that recycles organic matter, linking to biochemical processes (carbon, nitrogen cycles).
- Population dynamics: Carrying capacity (K) of an ecosystem is set by the amount of usable resources within niches; density‑dependent factors (disease, competition) act on specific niches.
- Evolution: Niche differentiation reduces competition, allowing adaptive radiation; keystone species can create new niches (e.g., beaver dams forming pond habitats).
- Genetics: Genetic diversity within a niche determines adaptive potential; population genetics calculations (Hardy‑Weinberg) are used to monitor genetic health of threatened populations.
Why These Concepts Matter (Exam‑Focused)
- Understanding ecosystems enables you to predict the consequences of environmental change – a frequent AO2/3 scenario.
- Grasping niche theory explains coexistence, competition and the mechanisms behind speciation – essential for high‑level essay questions.
- Quantitative biodiversity tools (indices, Hardy‑Weinberg) provide the data‑analysis skills required for AO2 marks.
- Evaluating threats and conservation measures demonstrates higher‑order thinking (AO3) and is a core component of the Cambridge exam.
- Taxonomic and phylogenetic knowledge links molecular biology to ecology, satisfying the cross‑topic integration expected at A‑level.
Suggested Diagrams for Revision
- Energy‑flow diagram of a temperate forest (sun → producers → herbivores → carnivores → decomposers) with parallel arrows for carbon and nutrient cycling.
- Side‑panel “Woodpecker niche”: habitat (deciduous trees), food (insect larvae), activity (diurnal), interactions (competition with other insectivores, mutualism with fungi).
- Phylogenetic tree highlighting a keystone species (e.g., sea otter) within Mammalia, with annotations of derived traits.
- Bar chart comparing species richness and Shannon index for three habitats (pond, grassland, urban park).
- Hardy‑Weinberg diagram showing genotype frequencies (p², 2pq, q²) and how selection shifts them over generations.
Sample Exam‑Style Questions (AO2/AO3)
- Define the terms ecosystem and niche. (2 marks)
- Explain how a beaver acts as an ecosystem engineer and discuss two consequences for biodiversity. (6 marks)
- A community of five species has the following abundances: 25, 25, 20, 20, 10. Calculate the Shannon–Wiener index and interpret the result in terms of species evenness. (5 marks)
- Analyse the likely impact of invasive zebra mussels on a freshwater lake ecosystem, referring to both trophic structure and nutrient cycling. (8 marks)
- Compare in‑situ and ex‑situ conservation, giving one advantage and one limitation of each approach. (4 marks)
- Using Hardy‑Weinberg, a population of butterflies has 36 % homozygous dominant (AA). Calculate the expected frequency of heterozygotes (Aa) and discuss what a deviation from this value might indicate about the population. (6 marks)
Practical / Analytical Activities (AO2)
- Field survey: Record species abundance in a local pond, calculate species richness, evenness and Shannon index, then write a brief evaluation of factors influencing the observed diversity (e.g., water chemistry, surrounding land use).
- Laboratory: Perform DNA barcoding on unknown insect specimens using the COI gene; construct a simple cladogram and discuss how molecular data can reveal cryptic species.
- Data analysis: Interpret a supplied predator–prey graph (Lotka‑Volterra) and explain how niche overlap can generate population oscillations.
- Genetics exercise: Given allele frequencies for a threatened plant, calculate heterozygosity and suggest a management action to maintain genetic diversity.
Key Take‑away Summary
- An ecosystem is the whole network of biotic and abiotic interactions; a niche is the specific role of a species within that network.
- Biodiversity is quantified by species richness, evenness and diversity indices; population genetics provides a quantitative measure of genetic diversity.
- Keystone species and ecosystem engineers have outsized effects on community structure and ecosystem processes.
- Major threats include habitat loss, over‑exploitation, invasive species, pollution and climate change – each with distinct ecological consequences.
- Conservation combines protected areas, habitat restoration, legislation, captive breeding and community involvement; effectiveness must be evaluated against ecological and socio‑economic criteria.
- Taxonomic hierarchy, binomial nomenclature and molecular phylogenetics give the framework for comparing species and assessing evolutionary relationships.
- All these concepts interlink with energy flow, nutrient cycles, population dynamics and evolutionary processes – essential for high‑level exam answers and for understanding real‑world biodiversity challenges.