define the terms ecosystem and niche

Learning Objectives (aligned with Cambridge International AS & A Level Biology 9700)

  • Define ecosystem and niche and explain their significance for biodiversity. (Key concept: Organisms in their environment)
  • Calculate species richness, evenness and diversity indices (Shannon‑Wiener, Simpson’s). (Key concept: Observation & experiment)
  • Explain the role of keystone species, ecosystem engineers and genetic diversity in maintaining ecosystems. (Key concept: Natural selection & evolution)
  • Identify major threats to biodiversity and evaluate the effectiveness of conservation strategies (in‑situ & ex‑situ). (Key concept: Human impact on the environment)
  • Describe the taxonomic hierarchy, binomial nomenclature and modern phylogenetic methods. (Key concept: Cells as the unit of life – molecular basis of classification)
  • Link ecosystems and niches to energy flow, nutrient cycles, population dynamics and evolutionary processes (AO2/AO3). (Key concepts: Energy flow, biochemical processes, DNA, natural selection)

Master‑Topic Checklist – Coverage of Syllabus 9700

Syllabus Topic Module in Notes Status Action Needed
1. Cell structureMissingCreate a “Cell Foundations” module
2. BiomoleculesMissingDevelop a “Macromolecules & Enzymes” module
3. EnzymesMissingIntegrate with biomolecules
4. Membranes & transportMissingAdd “Cellular Transport” module
5. Mitosis & meiosisMissingInclude “Cell Division” module
6. Nucleic acids & protein synthesisMissingLink to “Genetic Diversity” section
7. Transport in organismsMissingDevelop “Physiology of Transport” module
8. Gas exchange & respirationMissingInclude in “Energy Flow” box
9. Infectious diseaseMissingCreate “Pathogens & Immunity” module
10. ImmunityMissingCombine with disease module
11. Homeostasis (AS)MissingAdd “Regulation & Homeostasis” module
12. Photosynthesis (A‑level)MissingInsert in “Energy Flow” section
13. Respiration (A‑level)MissingInsert in “Energy Flow” section
14. Genetics (A‑level)Genetic diversity & population geneticsPartialExpand with Hardy‑Weinberg calculations
15. Evolution (A‑level)Evolution & Biodiversity sub‑sectionPartialAdd speciation mechanisms and adaptive radiation
16. Ecology (A‑level) – Topics 1‑4All covered (ecosystem, niche, biodiversity, threats, conservation)CompleteFine‑tune depth of evaluation
17. Human impact (A‑level)Threats & case‑study worksheetPartialInclude climate‑change scenario analysis
18. Classification, biodiversity & conservationCore of these notesCompleteLink explicitly to key concepts
19. Practical skills (A‑level)Practical/analytical activitiesCompleteProvide mark‑scheme pointers

Key Definitions

Ecosystem

An ecosystem is a self‑sustaining functional unit that includes:

  • Biotic components: populations and communities of organisms.
  • Abiotic components: climate, soil, water, light, nutrients, and physical factors.
  • Interactions: energy flow (sun → producers → consumers → decomposers) and nutrient cycling (e.g., carbon, nitrogen, phosphorus).
Why it matters: Understanding ecosystems allows prediction of how changes (e.g., habitat loss, climate change) affect the whole web of life, a core requirement for AO2/AO3 exam questions.

Niche

A niche is the “profession” or role of a species (or population) within an ecosystem. It comprises:

  • Range of abiotic conditions tolerated (temperature, moisture, pH).
  • Resources used (food, shelter, nesting sites).
  • Behavioural patterns (diurnal/nocturnal activity, foraging strategy).
  • Biotic interactions (predation, competition, mutualism, parasitism).
Why it matters: Niche differentiation explains species coexistence and underpins concepts of competition, adaptive radiation and speciation (AO2/AO3).

Comparison: Ecosystem vs. Niche

Aspect Ecosystem Niche
Scope Whole network of interacting biotic and abiotic components. Specific role of a single species (or population) within that network.
Components Populations, communities, climate, soil, water, energy flow, nutrient cycles. Habitat, resources used, activity pattern, inter‑specific interactions.
Scale From a puddle to a global biome. Usually species level (can be expressed for individuals).
Dynamics Succession, disturbance, climate change, anthropogenic impacts. Evolutionary adaptation, competitive exclusion, niche expansion or contraction.

Link to Cambridge Key Concepts (six overarching ideas)

Key Concept Relevant Biodiversity Content
Cells as the unit of life Genetic diversity, DNA barcoding, molecular phylogenetics.
Biochemical processes Energy flow through trophic levels; nutrient cycling.
DNA, genes & inheritance Population genetics (allele frequencies, heterozygosity), speciation.
Organisms in their environment Ecosystem structure, niche definition, keystone species.
Observation & experiment Diversity index calculations, field surveys, laboratory DNA barcoding.
Natural selection & evolution Evolution & Biodiversity sub‑section, adaptive radiation, niche differentiation.

Biodiversity Concepts (Topic 18)

1. Species Richness & Evenness

  • Species richness (S): total number of different species in a defined area.
  • Evenness (E): how equally individuals are distributed among the species present.

2. Diversity Indices

Index Formula What it measures
Shannon–Wiener (H′) H′ = – Σ (pᵢ ln pᵢ)  where pᵢ = nᵢ / N Both richness and evenness; higher = greater diversity.
Simpson’s Index (D) D = Σ (pᵢ²); 1 – D = probability that two random individuals belong to different species Emphasises dominance; lower D = higher diversity.
Evenness (E) E = H′ / ln S Standardises H′ to a 0–1 scale.

Worked Example (AO2)

Community A: 4 species, abundances 40, 30, 20, 10 (N = 100).

  1. pᵢ = 0.40, 0.30, 0.20, 0.10.
  2. H′ = –[(0.40 ln 0.40)+(0.30 ln 0.30)+(0.20 ln 0.20)+(0.10 ln 0.10)] ≈ 1.28.
  3. Evenness E = H′ / ln 4 = 1.28 / 1.386 ≈ 0.92 (high evenness).

3. Population Genetics (Extended)

  • Allele frequency (p, q): proportion of each allele in a population.
  • Hardy–Weinberg equation: p² + 2pq + q² = 1 (genotype frequencies).
  • Heterozygosity (H): probability that two randomly chosen alleles are different; H = 2pq.
  • Example calculation: In a beetle population, 64% are homozygous dominant (AA). p² = 0.64 → p = 0.8, q = 0.2. Expected heterozygotes (2pq) = 0.32 (32%).
Why it matters: Genetic diversity underpins a species’ capacity to adapt to environmental change – a key point for AO3 evaluation of conservation strategies.

4. Evolution & Biodiversity

  • Sources of variation: mutation, recombination, gene flow.
  • Natural selection: differential survival/reproduction based on phenotype; leads to changes in allele frequencies.
  • Speciation mechanisms:
    • Allopatric – geographic isolation (e.g., Darwin’s finches).
    • Sympatric – ecological or polyploidy‑driven (e.g., cichlid radiations).
  • Adaptive radiation: rapid evolution of multiple species from a common ancestor, each occupying a distinct niche (e.g., Hawaiian honeycreepers).
  • Link to niche: New niches created by ecosystem engineers or environmental change can drive adaptive radiation.

5. Keystone Species & Ecosystem Engineers (Evaluation Required)

  • Keystone species: Disproportionately large impact relative to abundance.
    • Mechanism: top‑down control of prey populations, cascade effects on vegetation.
    • Example: Sea otters → control sea‑urchins → protect kelp forests.
  • Ecosystem engineers: Modify physical environment, creating or destroying habitats.
    • Mechanism: physical alteration (dams, burrows) that changes water flow, sedimentation, or nutrient availability.
    • Example: Beavers build dams → create ponds → increase habitat heterogeneity, support amphibians and water‑birds.

Major Threats to Biodiversity

Threat Typical Impact Illustrative Case Study
Habitat loss & fragmentation Reduced population sizes, edge effects, loss of specialists. Amazon rainforest conversion to soy plantations (deforestation > 17 %/decade).
Over‑exploitation Population collapse, trophic cascades. Atlantic cod fisheries – stock collapsed in the 1990s.
Invasive species Competition, predation, disease transmission. Rats on New Zealand islands causing bird extinctions.
Pollution Habitat degradation, bioaccumulation, eutrophication. Coral bleaching driven by nutrient runoff and rising sea temperature.
Climate change Range shifts, phenological mismatches, increased extinction risk. Alpine plant communities moving upslope in the European Alps.

Case‑Study Worksheet – Climate‑Change‑Driven Niche Shifts

Task: Using the supplied distribution maps for the European red‑winged grasshopper (Trimerotropis cristata) and the common toad (Bufo bufo), answer the following (AO3):

  1. Predict how a 2 °C rise in average summer temperature will alter the grasshopper’s niche breadth and geographic range.
  2. Discuss the likely indirect effects on the toad’s niche, considering prey availability and breeding pond temperature.
  3. Evaluate two management actions (e.g., assisted migration, creation of climate‑refugia corridors) and justify which would be most effective for maintaining community stability.

Conservation Strategies (Evaluation of Effectiveness)

Strategy In‑situ / Ex‑situ Key Examples Advantages Limitations
Protected areas (national parks, nature reserves) In‑situ Yellowstone NP (USA), Kruger NP (South Africa) Preserves whole ecosystems; maintains natural processes. May be too small to support wide‑ranging species; enforcement challenges.
Habitat restoration & ecological corridors In‑situ Re‑forestation of peatlands in Ireland; wildlife overpasses in the UK. Reconnects fragmented populations, enhances gene flow. Long‑term funding required; success depends on surrounding land use.
Captive breeding & re‑introduction Ex‑situ → In‑situ California condor, Arabian oryx. Prevents immediate extinction; allows controlled genetic management. Risk of loss of wild behaviours; high cost; may not address original threats.
Legislation & trade control (CITES, national wildlife acts) Both Ban on ivory trade; regulation of shark‑fin imports. Provides legal framework; can reduce over‑exploitation. Enforcement varies; illegal trade may persist.
Community‑based conservation & sustainable use In‑situ Community forest management in Nepal; co‑management of marine reserves in Fiji. Encourages local stewardship; aligns livelihoods with biodiversity goals. Requires capacity building; success depends on socio‑economic incentives.

IUCN Red List Categories (AO3)

  • Extinct (EX)
  • Extinct in the Wild (EW)
  • Critically Endangered (CR)
  • Endangered (EN)
  • Vulnerable (VU)
  • Near Threatened (NT)
  • Least Concern (LC)
  • Data Deficient (DD)
  • Not Evaluated (NE)

Classification Systems (Taxonomy) – Connection to Biodiversity

  • Hierarchical ranks: Domain → Kingdom → Phylum → Class → Order → Family → Genus → Species.
  • Binomial nomenclature: Genus (capitalised) + specific epithet (lowercase), e.g., Panthera leo.
  • Cladistics: Classification based on shared derived characters (synapomorphies); produces phylogenetic trees that illustrate evolutionary relationships.
  • Molecular phylogenetics: Uses DNA/RNA sequences (e.g., cytochrome b, 16S rRNA, COI) to infer relationships; essential for modern biodiversity assessments and for identifying cryptic species.

Linking Ecosystem & Niche to Other Syllabus Topics

  • Energy flow: Photosynthesis (A‑level) provides the primary energy input; the position of a species in a food chain reflects its niche (primary consumer, secondary consumer, etc.).
  • Nutrient cycles: Decomposers occupy a niche that recycles organic matter, linking to biochemical processes (carbon, nitrogen cycles).
  • Population dynamics: Carrying capacity (K) of an ecosystem is set by the amount of usable resources within niches; density‑dependent factors (disease, competition) act on specific niches.
  • Evolution: Niche differentiation reduces competition, allowing adaptive radiation; keystone species can create new niches (e.g., beaver dams forming pond habitats).
  • Genetics: Genetic diversity within a niche determines adaptive potential; population genetics calculations (Hardy‑Weinberg) are used to monitor genetic health of threatened populations.

Why These Concepts Matter (Exam‑Focused)

  • Understanding ecosystems enables you to predict the consequences of environmental change – a frequent AO2/3 scenario.
  • Grasping niche theory explains coexistence, competition and the mechanisms behind speciation – essential for high‑level essay questions.
  • Quantitative biodiversity tools (indices, Hardy‑Weinberg) provide the data‑analysis skills required for AO2 marks.
  • Evaluating threats and conservation measures demonstrates higher‑order thinking (AO3) and is a core component of the Cambridge exam.
  • Taxonomic and phylogenetic knowledge links molecular biology to ecology, satisfying the cross‑topic integration expected at A‑level.

Suggested Diagrams for Revision

  1. Energy‑flow diagram of a temperate forest (sun → producers → herbivores → carnivores → decomposers) with parallel arrows for carbon and nutrient cycling.
  2. Side‑panel “Woodpecker niche”: habitat (deciduous trees), food (insect larvae), activity (diurnal), interactions (competition with other insectivores, mutualism with fungi).
  3. Phylogenetic tree highlighting a keystone species (e.g., sea otter) within Mammalia, with annotations of derived traits.
  4. Bar chart comparing species richness and Shannon index for three habitats (pond, grassland, urban park).
  5. Hardy‑Weinberg diagram showing genotype frequencies (p², 2pq, q²) and how selection shifts them over generations.

Sample Exam‑Style Questions (AO2/AO3)

  1. Define the terms ecosystem and niche. (2 marks)
  2. Explain how a beaver acts as an ecosystem engineer and discuss two consequences for biodiversity. (6 marks)
  3. A community of five species has the following abundances: 25, 25, 20, 20, 10. Calculate the Shannon–Wiener index and interpret the result in terms of species evenness. (5 marks)
  4. Analyse the likely impact of invasive zebra mussels on a freshwater lake ecosystem, referring to both trophic structure and nutrient cycling. (8 marks)
  5. Compare in‑situ and ex‑situ conservation, giving one advantage and one limitation of each approach. (4 marks)
  6. Using Hardy‑Weinberg, a population of butterflies has 36 % homozygous dominant (AA). Calculate the expected frequency of heterozygotes (Aa) and discuss what a deviation from this value might indicate about the population. (6 marks)

Practical / Analytical Activities (AO2)

  • Field survey: Record species abundance in a local pond, calculate species richness, evenness and Shannon index, then write a brief evaluation of factors influencing the observed diversity (e.g., water chemistry, surrounding land use).
  • Laboratory: Perform DNA barcoding on unknown insect specimens using the COI gene; construct a simple cladogram and discuss how molecular data can reveal cryptic species.
  • Data analysis: Interpret a supplied predator–prey graph (Lotka‑Volterra) and explain how niche overlap can generate population oscillations.
  • Genetics exercise: Given allele frequencies for a threatened plant, calculate heterozygosity and suggest a management action to maintain genetic diversity.

Key Take‑away Summary

  • An ecosystem is the whole network of biotic and abiotic interactions; a niche is the specific role of a species within that network.
  • Biodiversity is quantified by species richness, evenness and diversity indices; population genetics provides a quantitative measure of genetic diversity.
  • Keystone species and ecosystem engineers have outsized effects on community structure and ecosystem processes.
  • Major threats include habitat loss, over‑exploitation, invasive species, pollution and climate change – each with distinct ecological consequences.
  • Conservation combines protected areas, habitat restoration, legislation, captive breeding and community involvement; effectiveness must be evaluated against ecological and socio‑economic criteria.
  • Taxonomic hierarchy, binomial nomenclature and molecular phylogenetics give the framework for comparing species and assessing evolutionary relationships.
  • All these concepts interlink with energy flow, nutrient cycles, population dynamics and evolutionary processes – essential for high‑level exam answers and for understanding real‑world biodiversity challenges.

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